🧬 Bioinorganic Chemistry – Complete Notes
JEE ADV NEET IIT-JAM GATE CSIR-NET TGT/PGT
📌 What is Bioinorganic Chemistry? A growing interdisciplinary field focusing on the roles of metal ions in living systems.
1. Metalloporphyrins – The Core Concept
- Metal ion coordinated to 4 nitrogen atoms inside porphyrin ring → square planar geometry
- Axial sites are free for other ligands
- Examples: Hemoglobin Myoglobin Cytochromes Chlorophylls
- Porphyrin = derivative of macrocyclic ligand Porphine (unsubstituted tetra-pyrole + CH bridges)
- Positions labeled α,β,γ,δ or 5,10,15,20 → tetraphenyl derivatives (tpd) commonly used
- Metal-free porphyrin ligand has –2 charge (two inner H atoms replaced by metal ion)
- More rigid than crown ethers; stronger preference for d⁸ Ni²⁺ ion
⚠️ Size Effect: If metal ion too small (Ni²⁺) → ring ruffles. If too large → domed (sits above ring).
2. Role of Iron in Living Systems
Iron = most important transition metal in living systems (vital for plants + animals)
Three Iron Systems:
① Heme Iron (H)
Hemoglobin, Myoglobin, Cytochrome P₄₅₀
Contains porphyrin ring
Hemoglobin, Myoglobin, Cytochrome P₄₅₀
Contains porphyrin ring
② Non-heme Iron – Fe-S (NH)
Rubedoxin, Ferredoxins, Nitrogenase
Iron-sulphur compounds
Rubedoxin, Ferredoxins, Nitrogenase
Iron-sulphur compounds
③ Non-heme diiron oxo-bridged (NH)
Hemerythrin, Ribonucleotide reductase, Methane monooxygenase
Hemerythrin, Ribonucleotide reductase, Methane monooxygenase
📋 Table – Iron Proteins (MOST ASKED IN EXAMS!)
| Protein | Mol. Mass | Fe atoms | Oxidation | Source | H/NH | Function |
|---|---|---|---|---|---|---|
| Hemoglobin | 64500 | 4 | Fe²⁺ | Animals | H | O₂ transport |
| Myoglobin | 17500 | 1 | Fe²⁺ | Animals | H | O₂ storage |
| Cytochromes | 12500 | 4 | Fe²⁺ | Plants/Animals/Bacteria | H | Electron transfer |
| Ferredoxin | 6000–12000 | 2–8 | Fe²⁺/Fe³⁺ | Bacteria/Plants/Animals | NH | Electron transfer |
| Ruberodoxin | 6000 | 1 | Fe³⁺ | Bacteria | NH | Electron transfer |
| Ferritin | 45000 | 20% Fe | Fe²⁺ | Animals | NH | Iron storage |
| Transferritin | 76000 | 2 | Fe³⁺ | Animals | NH | Scavenging iron |
| Hemerythrin | 108000 | 2 | Fe²⁺ | Marine invertebrates | NH | O₂ transport |
| FeMo Protein | 220000 | 24–36 | — | Nitrogenase enzymes | NH | N₂ fixation in bacteria |
| Catalase | 280000 | — | Fe³⁺ | Living organism | H | Decomp of H₂O₂ |
| Peroxidase | 44000 | — | Fe³⁺ | Living organism | H | Decomp of H₂O₂ |
3. Hemoglobin (Hb) – O₂ Transport
- Contains heme groups + globin proteins
- Molar mass ≈ 64500; found in red blood cells (erythrocytes)
- 4 subunits: 2α (141 aa) + 2β (146 aa)
- Fe(II) attached via imidazole N of histidine (proximal); 6th site for O₂ (distal)
- Deoxy-Hb = high spin Fe(II), d²ₓ₋ᵧ² orbital occupied → Fe too large → sits 40 pm above ring → T state (tense)
- Oxy-Hb = low spin Fe(II) → smaller (75 pm) → slips into ring → R state (relaxed)
🔑 Key: Fe–N(imidazole) distance: Deoxy = 282 pm | Oxy = 197 pm
Cooperative Effect (Very Important!)
- Binding of 1st O₂ is hardest; each subsequent O₂ binds easier
- Equilibrium constants: K₁ < K₂ < K₃ < K₄
- K₄ is much larger than K₁ → last O₂ binds most readily
- This is the cooperative effect → sigmoidal O₂ dissociation curve
CO₂ Transport (Bohr's Effect)
- CO₂ (from muscles) → lowers pH → decreases Hb affinity for O₂ → releases O₂ to muscles
- CO₂ + H₂O ⇌ H₂CO₃ ⇌ H⁺ + HCO₃⁻ (enzyme: carbonic anhydrase)
- ~10–15% CO₂ transported as carbaminohemoglobin (CO₂ binds to –NH₂)
- Oxygenated Hb is more acidic: HbHₓ⁺ + 4O₂ ⇌ Hb(O₂)₄ + xH⁺
Hill Equation for Hemoglobin:
f = KpnO₂ / (1 + KpnO₂) where n = Hill constant
For Hb: n = 2.8 (physiological pH in muscle)
For Mb: n = 1 → hyperbolic curve
☠️ CO Poisoning: CO binds Fe²⁺ 200× stronger than O₂. CO + CN⁻, NO, PF₃ are stronger π-acceptors → prevent O₂ binding → Asphyxia
Genetic Defects:
1. Sickle Cell Anemia (SCA)
Hydrophilic Glutamic acid → replaced by Hydrophobic Valine in β-chain → reduces solubility → sickle-shaped RBCs
Hydrophilic Glutamic acid → replaced by Hydrophobic Valine in β-chain → reduces solubility → sickle-shaped RBCs
2. Absence of Methemoglobin Reductase
Fe²⁺ → Fe³⁺ (methemoglobin) → can't carry O₂
Normal blood has ~3% methemoglobin
Enzyme NADH-methemoglobin reductase converts back
Fe²⁺ → Fe³⁺ (methemoglobin) → can't carry O₂
Normal blood has ~3% methemoglobin
Enzyme NADH-methemoglobin reductase converts back
4. Myoglobin (Mb) – O₂ Storage
- Single heme group; molar mass ≈ 17000
- 5-coordinate high spin Fe(II) complex; t²₄g e²g config
- 153 amino acids; Fe(II) lies 40 pm above porphyrin plane
- Binds O₂ more strongly than Hb at low partial pressures (muscles)
- Hyperbolic oxygenation curve (n=1)
- In lungs: Hb + 4O₂ → Hb(O₂)₄ | In muscles: Hb(O₂)₄ + 4Mb → 4Mb(O₂) + Hb
5. Hemerythrin – Marine O₂ Carrier
- Non-heme iron protein in marine invertebrates
- MW = 108000; 8 subunits; each with 113 aa + 2 Fe(II) active site
- Bridging groups: 2 carboxylates (glutamate + aspartate) + OH⁻
- 1 O₂ binds to 2 Fe(II) → both oxidized to Fe(III) + peroxide (O₂²⁻)
- No cooperativity between subunits (unlike Hb)
- Oxyhemerythrin: antiferromagnetically coupled Fe(III) → diamagnetic, EPR inactive
- Raman spectroscopy: μ(O–O) at 845 cm⁻¹ (bound peroxide)
6. Hemocyanin – Invertebrate O₂ Carrier
- Copper-containing protein (NOT heme); blue blood protein
- Found in: Mollusca (whelks, snails, squid) and Arthropoda (crabs, lobsters, shrimps)
- Deoxy form: Cu(I) → colorless | Oxy form: Cu(II) → bright blue
- Active site: 2 Cu(I) ions (~460 pm apart); each bound by 3 histidine residues
- Blue color due to O²⁻→Cu²⁺ LMCT transition
- Like Hb: multiple subunits, binds O₂ cooperatively
- Oxy form: Cu–Cu = 360 pm | v(O–O) ≈ 750 cm⁻¹
7. Cytochromes – Electron Transfer
- Found in plants + animals; contain heme prosthetic groups
- Prosthetic group = compound required by enzyme → also called coenzyme
- Apoenzyme + prosthetic group = Holoenzyme
- Three types: Cyt-a, Cyt-b, Cyt-c
- Fe(II) attached to N of histidine (one side) + S atom of methionine (sixth site) → inert to O₂ and CO
- Reduction potentials: cyt-b (0.26 V) → cyt-c (0.26 V) → cyt-a (0.4 V)
- Electron flow:
b → c → a → O₂
Heme Types:
| Heme | R groups | Found in |
|---|---|---|
| Heme A | R₁=CH=CH₂, R₂=C₁₈H₃₀OH | Cytochrome a |
| Heme B (Protoporphyrin IX) | R₁=R₂=CH=CH₂ | Hb, Mb, cyt-b, peroxidase |
| Heme C | R₁=R₂=CH(CH₃)S–Protein | Cytochrome c |
Cytochrome P-450
- Absorbs at 450 nm with CO complexes (π→π* Soret bond)
- Functions as monooxygenase: inserts one O atom into substrate
- Active site: Fe in Fe(III) low spin octahedral
- One S of cysteine (not histidine) + H₂O at 6th site
- Reactions: RH → ROH | Aldehyde → Carboxylic acid | Alkene → Epoxide
- Found in kidney; oxidizes insoluble hydrocarbons → water-soluble ROH (excreted)
8. Iron-Sulfur Proteins (Non-heme)
Ruberodoxin
- Simplest NHIP; found in anaerobic bacteria; only 1 Fe atom
- Fe coordinated to 4 S atoms (cysteine) → distorted tetrahedral
- Oxidation state: +3; Fe–S distance: 224–233 pm; S–Fe–S angle: 104–114°
- No labile sulfur (inorganic S²⁻); one electron transfer agent
Ferredoxins (NHIP with multiple Fe)
| Type | Fe atoms | Structure | Properties |
|---|---|---|---|
| [2Fe–2S] (Fe₂S₂) | 2 | Di-μ-sulfido bridged high spin tetrahedral Fe(III) | S=0 oxidized (diamagnetic); S=½ reduced (EPR active) |
| [3Fe–4S] (Fe₃S₄) | 3 | Cubane [4Fe–4S] with one corner removed | 1e⁻ transfer; oxidized: ESR active (S=5/2 paramagnetic) |
| [4Fe–4S] (Fe₄S₄) | 4 | Cubane structure; most stable | S=0 oxidized (diamagnetic, EPR inactive); S=½ reduced (EPR active) |
💡 [4Fe–4S] = most common and most stable ferredoxins. Found in anaerobic bacteria. Oxidation state: +2.5 (delocalized)
9. Nitrogen Fixation
- N₂ → NH₃ (breaking N≡N, BDE = 945 kJ/mol)
- Haber-Bosch: 400–500°C, 200 atm, Fe/Mo catalyst → expensive
- Biological fixation: ambient T and P by bacteria
- Key bacteria: Clostridium pasteurianum, Azotobacter vinerlandii, Rhizobium (root nodules of legumes)
- Three types of nitrogenases: Vanadium, Iron, Molybdenum (most important)
- Molybdenum nitrogenase = 2 proteins: Fe protein (MW 60000) + MoFe protein (MW 220000–240000)
- Overall: N₂ + 16MgATP + 8H⁺ + 8e⁻ → 2NH₃ + 16MgADP + 16Pᵢ + H₂
Mo–N≡N →(2e⁻,2H⁺)→ Mo–N=NH₂ →(2e⁻,2H⁺)→ Mo–NH–NH₃ →(2e⁻,2H⁺)→ Mo + 2NH₃
10. Ferritin & Transferrin – Iron Storage/Transport
Ferritin (Iron Storage)
- 24 protein chains → hollow sphere 100 Å diameter (apoferritin)
- Iron core: ~45000 Fe(III) ions + hydroxo + oxo + phosphate ligands
- Core similar to ferrihydrite: (FeO·OH)₈(FeO·H₂PO₄)
- Found in liver, spleen, bone marrow
- Fe(II) enters via hydrophilic channels; oxidized by ferroxidase enzyme
Transferrin (Iron Transport)
- Binds Fe(III) very strongly (not Fe(II))
- MW ≈ 80000; 2 Fe(III) per molecule
- Fe(III) in distorted octahedral: 1N + 3O + chelating CO₃²⁻ or HCO₃⁻
- Binding constant ≈ 10²⁶ → extremely efficient scavenger
- Fe absorbed as Fe(II) → oxidized to Fe(III) by ceruloplasmin → binds transferrin
11. Electronic Spectra of Porphyrins
- Soret band (~400 nm) = strong; due to S₀→S₂ transition
- Q bands (450–750 nm) = weaker; due to S₀→S₁ transition
- Metal insertion → Soret becomes broad, Q-bands disappear
- Colors of Hb, Mb, catalase, cytochromes = intraligand π→π* transition
- d⁰, d², d³, d¹⁰ metals → little effect on spectrum
- dⁿ (n=4–9) metals → form metal-to-ligand π-bonds → hypsochromic (blue) shift
12. Photosynthesis
6CO₂ + 6H₂O →(hν)→ C₆H₁₂O₆ + 6O₂
(i) 2H₂O → 4H⁺ + O₂ (ii) 6CO₂ + 12H⁺ → C₆H₁₂O₆ + 3O₂
- Occurs in chloroplasts
- Chlorophylls = Mg²⁺ complexes with porphyrin ring (one pyrrole reduced = chlorin)
- Chlorophyll-a: R = CH₃ | Chlorophyll-b: R = CHO
- Absorption: red region 680–700 nm
- Mg²⁺ preferred → binds strongly + keeps macrocycle rigid → energy not dissipated by thermal vibrations
Photosystems:
PS-II (P₆₈₀)
Absorbs at 680 nm; initiating photosystem
Water oxidation: 2H₂O → 4H⁺ + O₂
Mn₄ cluster (3Mn(II) + 1Mn(III)) catalyzes O₂ evolution
Absorbs at 680 nm; initiating photosystem
Water oxidation: 2H₂O → 4H⁺ + O₂
Mn₄ cluster (3Mn(II) + 1Mn(III)) catalyzes O₂ evolution
PS-I (P₇₀₀)
Absorbs at 700 nm
Reduces NADP⁺ → NADPH via ferredoxin
Net: 2H₂O + 2NADP⁺ + 8 photons → 2NADPH + 2H⁺ + O₂
Absorbs at 700 nm
Reduces NADP⁺ → NADPH via ferredoxin
Net: 2H₂O + 2NADP⁺ + 8 photons → 2NADPH + 2H⁺ + O₂
13. Zinc Metalloenzymes
Carboxypeptidase-A
- Pancreatic enzyme; catalyzes hydrolysis of peptide bonds
- 307 amino acids + 1 Zn²⁺; MW ≈ 34800
- Zn²⁺ coordinated to: His-69, His-196, Glu-72 (bidentate) + H₂O
- Hydrophobic pocket accommodates organic group of peptide
Carbonic Anhydrase
- Catalyzes: CO₂ + H₂O ⇌ HCO₃⁻ + H⁺ (rate increased ~10⁶×)
- MW ≈ 30000; 260 aa; Zn²⁺ coordinated tetrahedrally to His-94, His-96, His-119 + H₂O
- Zn²⁺ more acidic than in carboxypeptidase → neutral histidines (not glutamate)
- Mechanism: Zn–OH⁻ attacks CO₂ → transient Zn²⁺ with carbonato oxygen from HCO₃⁻
💡 Nature prefers Zn(II) at hydrolytic enzyme active sites because: no accessible redox states + forms 4 and higher coordination + strong Lewis acid
14. Superoxide Dismutases (SOD)
- Catalyzes: 2O₂⁻ + 2H⁺ → H₂O₂ + O₂
- Three types: CuZnSOD (eukaryotes) | MnSOD (bacteria) | FeSOD (bacteria)
- CuZnSOD: MW ≈ 16000; Cu²⁺ = functional (square pyramidal, 4 His-N + H₂O); Zn²⁺ = structural support
- Zn²⁺ can be replaced by Co or Cd → retains activity; Cu²⁺ cannot be replaced
15. Blue Copper Proteins
| Type | Features | Examples |
|---|---|---|
| Type 1 | Intense blue (λ=600nm), S→Cu²⁺ LMCT, EPR active (narrow hyperfine), trigonal coordination | Plastocyanin, Azurin, Ceruloplasmin |
| Type 2 | Normal EPR, tetragonal coordination, no blue colour | Galactase oxidase |
| Type 3 | Two Cu(I), ~360 pm apart, EPR inactive (antiferromagnetic), O₂ binding | Hemocyanin, Laccase |
Plastocyanin
- Found in chloroplasts; MW ≈ 10500; 1 Cu atom; 97–104 aa
- Involved in electron transfer in photosynthesis (PS-I and PS-II bridge)
- Distorted tetrahedral: 2 His-N + 1 S(Met) + 1 S(Cys)
Ceruloplasmin
- Intensely blue copper protein; MW ≈ 135000; 6–7 Cu atoms
- Oxidizes Fe(II) → Fe(III) for transferrin binding
- Deficiency → Wilson's disease
16. Vitamin B₁₂ / Coenzyme B₁₂ (Cyanocobalamin)
- Nature's only organometallic compounds
- Co(III) coordinated to 4 N of corrin ring (modified porphyrin; one less CH bridge)
- 5th: imidazole N; 6th: CN⁻ (in vitro) / water (in vivo)
- Deficiency → pernicious anaemia
- Vitamin B₁₂ = cyanocobalamin; Coenzyme B₁₂ = 5′-deoxyadenosylcobalamin
- Co(III) → d⁶ low spin octahedral → diamagnetic + EPR inactive
- Coenzyme B₁₂ catalyzes 1,2-rearrangements; methyl group transfer
- Bacteria can methylate heavy metals (Hg, Pb, Sn, Pd, Pt) → toxic species like Hg(CH₃) and Pb(CH₃)₄
⚠️ Corrin ring vs Porphyrin: Corrin is less symmetric + less unsaturated than porphyrin → can stabilize Co(I) state (porphyrin can't).
17. Cisplatin – Anticancer Drug
- Discovered 1969 by B. Rosenberg: cis-[Pt(NH₃)₂Cl₂]
- Inhibits tumor cell division; binds N-7 of adjacent guanine bases on DNA
- trans-isomer is inactive → chelation at cis-positions is essential
- Side effects: kidney damage + neurotoxicity → replaced by Carboplatin
- Most effective against testicular cancer
18. Metal Complexes in Medicine – Quick Table
| Disease | Treatment / Complex | Details |
|---|---|---|
| Lead poisoning | EDTA (CaNa₂), BAL, Penicillamine | Chelation therapy |
| Wilson's disease | D-penicillamine | Cu overload; ceruloplasmin deficiency |
| Arthritis | Na₃[Au(S₂O₃)₂] (Sanochrysin), Auranofin | Au(I) complexes |
| Hypercalcemia | Ga(NO₃)₃ (gallium nitrate) | Rapid Ca loss from bones |
| Cancer | Cisplatin [Pt(NH₃)₂Cl₂] | cis-isomer only active |
| Siderosis | Desferrioxamine-B | Excess iron; high affinity for Fe(III) |
| MRI contrast | Gd(III), Fe(III), Mn(II) | Paramagnetic metals alter relaxation |
19. Siderophores
- Iron-containing complexes in microorganisms
- Also called siderochromes (many intensely coloured)
- Low MW (500–1000); classified as: ferrichromes, ferrioxamines, entrabactins
- Chelating ligands → high spin octahedral complexes with Fe(III)
- Stable but labile → iron transported + transferred within bacteria
20. Xanthine Oxidase
- Contains: 2 identical subunits; each with 1 Mo + 2 Fe₂S₂ + 1 FAD
- MW ≈ 275000; catalyzes: Xanthine → Uric acid
- Mo(VI) site: 2e⁻ oxidation of xanthine → reduces to Mo(IV) → regenerated
- Electron flow: Xanthine → Mo(VI) → 2Fe₂S₂ → FAD → O₂
- Excess uric acid → gout; treated with xanthine oxidase inhibitors
21. Na⁺/K⁺-ATPase Pump
- Active transport; hydrolyzes ATP → ADP + Pᵢ
- Pumps: 3 Na⁺ out + 2 K⁺ in per ATP hydrolyzed
- Enzyme = α + β subunits (tetramer αβ₂); 2 ATP binding sites on α-subunit
- Ionophores (ion-bearers): Nonactin, Valinomycin → selectivity for K⁺ over Na⁺
- 3Na⁺(in) + 2K⁺(out) + ATP + H₂O → 3Na⁺(out) + 2K⁺(in) + ADP + Pi
22. Biological Roles of Metals – Master Table
| Metal | Related Compound | Function |
|---|---|---|
| Fe | Hemoglobin, Myoglobin, Hemerythrin, Cytochrome P-450, Catalase, Ferredoxin, Ferritin, Transferrin, Siderophores | O₂ transport/storage, Oxygenases, Electron transfer, Iron storage/transport |
| Co | Coenzyme B₁₂ | Methylation of organic compounds |
| Cu | Hemocyanin, Ceruloplasmin, Amine oxidase | O₂ carrier, Fe transport, Amine oxidation |
| Zn | Carboxypeptidase, Carbonic anhydrase | Hydrolysis of peptide bonds / CO₂ hydration |
| Mg | Chlorophyll, Phosphotransferase | Photosynthesis, Phosphate hydrolysis |
| Mn | Arginase, PS-II (Mn₄ cluster) | Electron transfer, Water oxidation |
| Fe,Mo | Nitrogenase | Nitrogen fixation |
| Cu,Zn,Mo | Superoxide dismutase | Dismutation of O₂⁻ |
| Ni | Urease | Hydrolysis of urea → CO₂ + NH₃ |
🎯 MCQ Practice
Q1. Which is a heme iron protein?
(a) Ruberodoxin (b) Transferrin (c) Hemerythrin (d) Cytochrome-c
✅ Answer: (d) Cytochrome-c
(a) Ruberodoxin (b) Transferrin (c) Hemerythrin (d) Cytochrome-c
✅ Answer: (d) Cytochrome-c
Q2. Metal ions involved in electron transport in biological systems:
(a) Na⁺ and K⁺ (b) Zn²⁺ and Mg²⁺ (c) Ca²⁺ and Mg²⁺ (d) Cu²⁺ and Fe²⁺
✅ Answer: (d) Cu²⁺ and Fe²⁺
(a) Na⁺ and K⁺ (b) Zn²⁺ and Mg²⁺ (c) Ca²⁺ and Mg²⁺ (d) Cu²⁺ and Fe²⁺
✅ Answer: (d) Cu²⁺ and Fe²⁺
Q3. In transformation of oxyhemoglobin to deoxyhemoglobin:
(a) Fe²⁺ low spin → Fe²⁺ high spin (b) Fe²⁺ low spin → Fe³⁺ low spin
(c) Fe²⁺ high spin → Fe²⁺ low spin (d) Fe²⁺ high spin → Fe²⁺ high spin
✅ Answer: (a) Fe²⁺ in low spin changes to Fe²⁺ in high spin
(a) Fe²⁺ low spin → Fe²⁺ high spin (b) Fe²⁺ low spin → Fe³⁺ low spin
(c) Fe²⁺ high spin → Fe²⁺ low spin (d) Fe²⁺ high spin → Fe²⁺ high spin
✅ Answer: (a) Fe²⁺ in low spin changes to Fe²⁺ in high spin
Q4. Oxygen-free form of myoglobin is:
(a) 5-coordinate high spin Fe(II) (b) 6-coordinate low spin Fe(II)
(c) 5-coordinate high spin Fe(III) (d) 5-coordinate low spin Fe(III)
✅ Answer: (a) 5-coordinate high spin Fe(II) complex
(a) 5-coordinate high spin Fe(II) (b) 6-coordinate low spin Fe(II)
(c) 5-coordinate high spin Fe(III) (d) 5-coordinate low spin Fe(III)
✅ Answer: (a) 5-coordinate high spin Fe(II) complex
Q5. Iron-sulphur clusters in biological systems are involved in:
(a) proton transfer (b) atom transfer (c) group transfer (d) electron transfer
✅ Answer: (d) electron transfer
(a) proton transfer (b) atom transfer (c) group transfer (d) electron transfer
✅ Answer: (d) electron transfer
Q6. Metal involved in dioxygen transport besides Fe:
(a) Co (b) Zn (c) Mg (d) Cu
✅ Answer: (d) Cu (in Hemocyanin)
(a) Co (b) Zn (c) Mg (d) Cu
✅ Answer: (d) Cu (in Hemocyanin)
Q7. Myoglobin is a:
(d) di-oxygen binding metalloprotein
✅ Answer: (d)
(d) di-oxygen binding metalloprotein
✅ Answer: (d)
Q8. Oxidation state of iron in met-hemoglobin:
(a) three (b) two (c) four (d) zero
✅ Answer: (a) three (Fe³⁺)
(a) three (b) two (c) four (d) zero
✅ Answer: (a) three (Fe³⁺)
Q9. Metal ions in active site of nitrogenase cofactor:
(a) Fe, Mo (b) Fe, W (c) Fe, Cu (d) Fe, Ni
✅ Answer: (a) Fe, Mo
(a) Fe, Mo (b) Fe, W (c) Fe, Cu (d) Fe, Ni
✅ Answer: (a) Fe, Mo
Q10. Metalloprotein that converts oxygen to water:
(a) catalase (b) cytochrome-c oxidase (c) haloperoxidase (d) hemoglobin
✅ Answer: (b) cytochrome-c oxidase
(a) catalase (b) cytochrome-c oxidase (c) haloperoxidase (d) hemoglobin
✅ Answer: (b) cytochrome-c oxidase
Q11. In oxyhemoglobin, iron centre is best described as:
(a) high spin Fe(II) (b) high spin Fe(III) (c) low spin Fe(III) (d) low spin Fe(II)
✅ Answer: (d) low spin Fe(II)
(a) high spin Fe(II) (b) high spin Fe(III) (c) low spin Fe(III) (d) low spin Fe(II)
✅ Answer: (d) low spin Fe(II)
Q12. Metal atom in active site of carboxypeptidase enzyme:
(a) cobalt (b) zinc (c) iron (d) magnesium
✅ Answer: (b) zinc
(a) cobalt (b) zinc (c) iron (d) magnesium
✅ Answer: (b) zinc
Q13. Coordination geometry of Cu(II) in type-1 copper protein plastocyanin:
(a) square planar (b) tetrahedral (c) octahedral (d) distorted tetrahedral
✅ Answer: (d) distorted tetrahedral
(a) square planar (b) tetrahedral (c) octahedral (d) distorted tetrahedral
✅ Answer: (d) distorted tetrahedral
Q14. Ligand system in vitamin B₁₂:
(a) porphyrin (b) corrin (c) phthalocyanin (d) crown ether
✅ Answer: (b) corrin
(a) porphyrin (b) corrin (c) phthalocyanin (d) crown ether
✅ Answer: (b) corrin
Q15. Carboxypeptidase contains:
(a) Zn(II) + hydrolysis CO₂ (b) Mg(II) + hydrolysis CO₂ (c) Zn(II) + hydrolysis peptide bonds (d) Mg(II) + hydrolysis peptide bonds
✅ Answer: (c) Zn(II) and hydrolysis peptide bonds
(a) Zn(II) + hydrolysis CO₂ (b) Mg(II) + hydrolysis CO₂ (c) Zn(II) + hydrolysis peptide bonds (d) Mg(II) + hydrolysis peptide bonds
✅ Answer: (c) Zn(II) and hydrolysis peptide bonds
Q16. Bacterial ruberodoxin — Fe atoms / Sulfur bridges / Cysteine ligands:
(a) 4,4,4 (b) 2,2,4 (c) 2,2,2 (d) 1,0,4
✅ Answer: (d) 1, 0, 4
(a) 4,4,4 (b) 2,2,4 (c) 2,2,2 (d) 1,0,4
✅ Answer: (d) 1, 0, 4
Q17. Well-known naturally occurring organometallic compound:
(a) Vitamin B₁₂ coenzyme (b) chlorophyll (c) cytochrome P-450 (d) myoglobin
✅ Answer: (a) Vitamin B₁₂ coenzyme
(a) Vitamin B₁₂ coenzyme (b) chlorophyll (c) cytochrome P-450 (d) myoglobin
✅ Answer: (a) Vitamin B₁₂ coenzyme
Q22. Changes when O₂ binds to hemerythrin:
(a) B and C (b) B and D (c) A and D (d) A and C
✅ Answer: (b) B and D — both Fe atoms oxidized + O₂ binds to both + H-bonded
(a) B and C (b) B and D (c) A and D (d) A and C
✅ Answer: (b) B and D — both Fe atoms oxidized + O₂ binds to both + H-bonded
Q25. Mg²⁺ preferred in photosynthesis by chlorophyll because:
(a) strong spin-orbit coupling (b) weak spin-orbit coupling (c) heavy metal (d) binds strongly with chlorophyll
✅ Answer: (d) it binds strongly with chlorophyll and keeps macrocycle rigid
(a) strong spin-orbit coupling (b) weak spin-orbit coupling (c) heavy metal (d) binds strongly with chlorophyll
✅ Answer: (d) it binds strongly with chlorophyll and keeps macrocycle rigid
Q26. Transition metal in vitamin B-12:
(a) Fe (b) Cu (c) Co (d) Mg
✅ Answer: (c) Co
(a) Fe (b) Cu (c) Co (d) Mg
✅ Answer: (c) Co
Q27. Metal in carbonic anhydrase:
(a) Mn (b) Fe (c) Zn (d) Cu
✅ Answer: (c) Zn
(a) Mn (b) Fe (c) Zn (d) Cu
✅ Answer: (c) Zn
Q28. Nature chose Zn(II) at hydrolytic enzyme active sites because:
(a) poor Lewis acid (b) no chemically accessible redox states ✅ (c) forms 4+ coord (d) weak with O-donors
✅ Answer: (b) Zn(II) does not have chemically accessible redox states
(a) poor Lewis acid (b) no chemically accessible redox states ✅ (c) forms 4+ coord (d) weak with O-donors
✅ Answer: (b) Zn(II) does not have chemically accessible redox states
Q31. Predominant metal in PS-II reaction centre:
(a) Zn (b) Cu (c) Mn (d) Fe
✅ Answer: (c) Mn
(a) Zn (b) Cu (c) Mn (d) Fe
✅ Answer: (c) Mn
Q34. Oxymyoglobin Mb(O₂) and oxyhemoglobin Hb(O₂)₄ are respectively:
(a) paramagnetic and paramagnetic (b) diamagnetic and diamagnetic
(c) paramagnetic and diamagnetic (d) diamagnetic and paramagnetic
✅ Answer: (b) diamagnetic and diamagnetic
(a) paramagnetic and paramagnetic (b) diamagnetic and diamagnetic
(c) paramagnetic and diamagnetic (d) diamagnetic and paramagnetic
✅ Answer: (b) diamagnetic and diamagnetic
Q35. Number of O₂ molecules one hemerythrin molecule can transport:
(a) 4 (b) 8 (c) 3 (d) 4
✅ Answer: (b) 8 (8 subunits × 1 O₂ per subunit)
(a) 4 (b) 8 (c) 3 (d) 4
✅ Answer: (b) 8 (8 subunits × 1 O₂ per subunit)
🔥 Exam Tips & High-Priority Topics
TOP 10 Most Asked Concepts:
- ✅ Hemoglobin structure, T-state vs R-state, cooperative effect
- ✅ Fe(II) spin state change: deoxy ↔ oxy hemoglobin
- ✅ Table of iron proteins (functions, oxidation states)
- ✅ Cisplatin mechanism + why cis is active, trans inactive
- ✅ Vitamin B₁₂ – corrin ring, Co(III), organometallic
- ✅ Nitrogen fixation – Haber-Bosch vs biological; FeMo protein
- ✅ Ferredoxin types [2Fe-2S], [3Fe-4S], [4Fe-4S] – spin states
- ✅ Zn enzymes: carboxypeptidase + carbonic anhydrase (coordination)
- ✅ Hemocyanin vs Hemerythrin vs Hemoglobin (differences)
- ✅ Photosystem I and II – metals involved (Mn, Mg, Fe, Cu)
❌ Common Mistakes:
- Hemerythrin is NON-heme (not heme iron protein)
- Myoglobin stores O₂ (not transports); Hemoglobin transports
- Vitamin B₁₂ = corrin ring (NOT porphyrin)
- Ruberodoxin has ZERO labile sulfur (inorganic S²⁻)
- Trans-cisplatin = INACTIVE; only cis-isomer is anticancer
- Hemocyanin uses Cu (NOT Fe or Heme)
- Ceruloplasmin deficiency = Wilson's disease (copper overload)
🧠 Memory Tricks:
- "HMC Transport O₂" = Hemoglobin, Myoglobin (vertebrates), Hemerythrin (marine), Hemocyanin (arthropods/molluscs)
- Fe size: High spin (big, 92 pm) → can't fit in ring | Low spin (small, 75 pm) → fits in ring
- Ferredoxin types: 2-2, 3-4, 4-4 (Fe–S numbers)
- Cytochrome electron flow: b → c → a → O₂ (alphabetical!)
- Bohr's Effect: More CO₂ + exercise → lower pH → Hb releases O₂ → muscles get O₂
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